Package de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.exact_fisher_test

Class ContTable

java.lang.Object

de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.exact_fisher_test.ContTable

public class ContTable
extends Object

Constructor Summary

Constructors

Constructor	Description
ContTable(int a, int b, int c, int d, boolean swapIfNeeded)

Method Summary

Modifier and Type	Method	Description
FisherProbability	getOneAndTwoSidedFisherProbability(boolean alsoCalcTwoSided)	One and two sided Fisher test Calculate the probability of given arrangement or any more extreme arrangement.
static BigDecimal	getPvalueForGivenTable(int a, int b, int c, int d)
String	toString()

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

ContTable

public ContTable(int a,
int b,
int c,
int d,
boolean swapIfNeeded)

Method Details

toString

public String toString()

Overrides:

toString in class Object

getOneAndTwoSidedFisherProbability

public FisherProbability getOneAndTwoSidedFisherProbability(boolean alsoCalcTwoSided)

One and two sided Fisher test Calculate the probability of given arrangement or any more extreme arrangement. The p-value for the same or a stronger association.

Parameters:

calculationCache -

Returns:

P one and two sided

getPvalueForGivenTable

public static BigDecimal getPvalueForGivenTable(int a,
int b,
int c,
int d)