Package org

Class BioStatisticalCategoryDataset

java.lang.Object

org.jfree.data.AbstractDataset

org.jfree.data.statistics.DefaultStatisticalCategoryDataset

org.BioStatisticalCategoryDataset

All Implemented Interfaces:

ObjectInputValidation, Serializable, Cloneable, CategoryDataset, Dataset, KeyedValues2D, RangeInfo, StatisticalCategoryDataset, Values2D

public class BioStatisticalCategoryDataset
extends DefaultStatisticalCategoryDataset
implements RangeInfo

Author:

Christian Klukas (c) 2004 IPK-Gatersleben

See Also:

Serialized Form

Constructor Summary

Constructors

Constructor	Description
BioStatisticalCategoryDataset(float ttestMarkCircleSize)

Method Summary

Modifier and Type	Method	Description
void	add(double mean, double standardDeviation, Comparable rowKey, Comparable columnKey, boolean ttestIsRef, boolean ttestIsDiff, String unit, String timeunit, boolean datasetWillBeShownWithStdDev, boolean showOnlyHalfErrorBar)	Adds a mean, a standard deviation and the info about the t test to the table.
void	add(double mean, double standardDeviation, Comparable rowKey, Comparable columnKey, boolean ttestIsRef, boolean ttestIsDiff, String unit, String timeunit, boolean datasetWillBeShownWithStdDev, Color color1, Color color2, boolean showOnlyHalfErrorBar)
Color	getColor1ForRowKey(Comparable rowKey)
Color	getColor2ForRowKey(Comparable rowKey)
String	getDomainUnits()
Number	getMaximumRangeValue()	Returns the maximum value in the dataset's range (or null if all the values in the range are null).
Number	getMinimumRangeValue()	Returns the minimum value in the dataset's range (or null if all the values in the range are null).
String	getRangeUnits()
boolean	getTTestIsH1(int row, int column)	Returns the true, if this is the reference sample or if no calculation is done.
boolean	getTTestIsRef(int row, int column)	Returns the true, if this is the reference sample or if no calculation is done.
float	getTtestMarkCircleSize()

Methods inherited from class org.jfree.data.statistics.DefaultStatisticalCategoryDataset

add, add, drawOnlyTopOfErrorBar, getColumnCount, getColumnIndex, getColumnKey, getColumnKeys, getErrorBarLen, getMeanValue, getMeanValue, getRowCount, getRowIndex, getRowKey, getRowKeys, getStdDevValue, getStdDevValue, getValue, getValue, getValueRange, setDrawOnlyTopOfErrorBar, setErrorBarLen

Methods inherited from class org.jfree.data.AbstractDataset

addChangeListener, clone, getGroup, removeChangeListener, setGroup, validateObject

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.jfree.data.Dataset

addChangeListener, getGroup, removeChangeListener, setGroup

Methods inherited from interface org.jfree.data.RangeInfo

getValueRange

Constructor Details

BioStatisticalCategoryDataset

public BioStatisticalCategoryDataset(float ttestMarkCircleSize)

Method Details

add

public void add(double mean,
double standardDeviation,
Comparable rowKey,
Comparable columnKey,
boolean ttestIsRef,
boolean ttestIsDiff,
String unit,
String timeunit,
boolean datasetWillBeShownWithStdDev,
Color color1,
Color color2,
boolean showOnlyHalfErrorBar)

add

public void add(double mean,
double standardDeviation,
Comparable rowKey,
Comparable columnKey,
boolean ttestIsRef,
boolean ttestIsDiff,
String unit,
String timeunit,
boolean datasetWillBeShownWithStdDev,
boolean showOnlyHalfErrorBar)

Adds a mean, a standard deviation and the info about the t test to the table.

Parameters:

mean - the mean.

standardDeviation - the standard deviation.

rowKey - the row key.

columnKey - the column key.

ttestIsRef - True, if this is the reference, False if not

ttestIsDiff - True, if the t test is done and H1 found to be probable, false if H0 is probable

unit - The unit of the measurement e.g. mm

timeunit - The time unit of the measurement e.g. day

getTTestIsRef

public boolean getTTestIsRef(int row,
int column)

Returns the true, if this is the reference sample or if no calculation is done. False, if it is no rerence sample. The case that no calculation is done can be recognized be calling getTTestIsH1, if this is also true, then no calculation is done (true, true : would make no sense).

Parameters:

row - the row index (zero-based).

column - the column index (zero-based).

Returns:

True, if reference or no calculation is done for this sample/value.

getTTestIsH1

public boolean getTTestIsH1(int row,
int column)

Returns the true, if this is the reference sample or if no calculation is done. False, if it is no rerence sample. The case that no calculation is done can be recognized be calling getTTestIsH1, if this is also true, then no calculation is done (true, true : would make no sense).

Parameters:

row - the row index (zero-based).

column - the column index (zero-based).

Returns:

True, if H1 is probable, False if H0 is probable, also True, if no calculation is done.

getTtestMarkCircleSize

public float getTtestMarkCircleSize()

getRangeUnits

public String getRangeUnits()

getDomainUnits

public String getDomainUnits()

getMaximumRangeValue

public Number getMaximumRangeValue()

Description copied from class: DefaultStatisticalCategoryDataset

Returns the maximum value in the dataset's range (or null if all the values in the range are null).

Specified by:

getMaximumRangeValue in interface RangeInfo

Overrides:

getMaximumRangeValue in class DefaultStatisticalCategoryDataset

Returns:

the maximum value.

getMinimumRangeValue

public Number getMinimumRangeValue()

Description copied from class: DefaultStatisticalCategoryDataset

Returns the minimum value in the dataset's range (or null if all the values in the range are null).

Specified by:

getMinimumRangeValue in interface RangeInfo

Overrides:

getMinimumRangeValue in class DefaultStatisticalCategoryDataset

Returns:

the minimum value.

getColor1ForRowKey

public Color getColor1ForRowKey(Comparable rowKey)

getColor2ForRowKey

public Color getColor2ForRowKey(Comparable rowKey)