View Issue Details

IDProjectCategoryView StatusLast Update
0000040VANTED 2.6.4[VANTED] Corepublic2018-02-07 17:01
Reporterdimitar.garkovAssigned To 
PriorityhighSeveritymajorReproducibilityalways
Status acknowledgedResolutionopen 
PlatformPCOSUbuntuOS Version14.04
Product Version[VANTED] 2.6.4 
Target VersionFixed in Version 
Summary0000040: Difference between KEGG Image Graph and extracted KGML Graph
Description

There are edges that are missing from the KGML description file, which are represented, although differently, in the graph shown as image in KEGG. These edges had to be intentionally left out. since they are foreign to the organism, but still part of the general pathway.

Steps To Reproduce

Download any KEGG pathway.
Open Graph as Image in the website.
Compare.

Additional Information

There is a way to retrieve those using the provided KEGG reference pathways and then build onto the downloaded KGML.

Tagsfeature, kegg
Attach Tags
TraceabilityN/A

Activities

There are no notes attached to this issue.

Issue History

Date Modified Username Field Change
2017-11-19 16:51 dimitar.garkov New Issue
2017-11-19 16:51 dimitar.garkov Tag Attached: feature
2017-11-19 16:51 dimitar.garkov Tag Attached: kegg
2017-11-19 17:02 dimitar.garkov Status new => acknowledged
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