Package de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.transpath

Class TranspathPathway

java.lang.Object

de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.transpath.TranspathEntity

de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.transpath.TranspathPathway

All Implemented Interfaces:

TranspathEntityType

public class TranspathPathway
extends TranspathEntity

Field Summary

Fields

Modifier and Type	Field	Description
String	ALIASES
String	COMMENT
String	ID
String	MOLECULE
String	NAME
String	REACTION
String	REFERENCE
String	SUBFAMILY
String	SUPERFAMILY
String	TYPE

Constructor Summary

Constructors

Constructor	Description
TranspathPathway()

Method Summary

Modifier and Type	Method	Description
void	addElementsToGraph(Graph g, String clusterID, HashMap<String,Node> graphElementId2graphNode)
String	getKey()
String	getXMLstartEndEntity()
void	processXMLentityValue(String environment, String value)
String	toString()

Methods inherited from class de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.transpath.TranspathEntity

printTodo

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Details

ID

public String ID

NAME

public String NAME

ALIASES

public String ALIASES

TYPE

public String TYPE

SUPERFAMILY

public String SUPERFAMILY

SUBFAMILY

public String SUBFAMILY

REACTION

public String REACTION

MOLECULE

public String MOLECULE

COMMENT

public String COMMENT

REFERENCE

public String REFERENCE

Constructor Details

TranspathPathway

public TranspathPathway()

Method Details

getKey

public String getKey()

toString

public String toString()

Overrides:

toString in class Object

processXMLentityValue

public void processXMLentityValue(String environment,
String value)

Specified by:

processXMLentityValue in interface TranspathEntityType

Overrides:

processXMLentityValue in class TranspathEntity

addElementsToGraph

public void addElementsToGraph(Graph g,
String clusterID,
HashMap<String,Node> graphElementId2graphNode)

getXMLstartEndEntity

public String getXMLstartEndEntity()