Package de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.dbe

Class AlternativeIdentifierTableData

java.lang.Object

de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.dbe.TableData

de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.dbe.AlternativeIdentifierTableData

public class AlternativeIdentifierTableData
extends TableData

Field Summary

Fields inherited from class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.dbe.TableData

MAX_COLUMN

Constructor Summary

Constructors

Constructor	Description
AlternativeIdentifierTableData()

Method Summary

Modifier and Type	Method	Description
static TableData	getAlternativeTableData(ArrayList<String[][]> alternativeIDs)
static int	processAdditionaldentifiers(boolean processAllExistingIDs, boolean processAllNewIDs, TableData myData, ExperimentInterface md, BackgroundTaskStatusProviderSupportingExternalCall optStatus, double optStartProgress, double optEndProgress, StringBuilder statusMessage, boolean skipFirstRow, HashSet<Integer> ignoreColumns)
static int	processAdditionaldentifiers(boolean processAllExistingIDs, TableData myData, ExperimentInterface md, BackgroundTaskStatusProviderSupportingExternalCall optStatus, double optStartProgress, double optEndProgress, StringBuilder statusMessage, boolean skipFirstRow)

Methods inherited from class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.dbe.TableData

addCellData, getCellData, getCellDataDate, getCellDataDateObject, getDataInScrollbars, getExcelColumnName, getMaximumCol, getMaximumRow, getMaximumRow, getRelevantAffymetrixAnnotationColumnHeaders, getSamples, getSampleValues, getStringRec, getSubstanceColumnInformation, getSubstanceColumnInformation, getTableStringData, getTransposedDataset, getUnicodeStringCellData, isDBEinputForm, isDBEtransposedInputForm, isGeneExpressionFileFormatForm, processAdditionaldentifiers, processAffymetrixAnnotationColumns, processCellContentRemoveStringTags, processGOanno, setStringRec, showDataDialog, showDataDialog, splitCells, toString

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

AlternativeIdentifierTableData

public AlternativeIdentifierTableData()

Method Details

processAdditionaldentifiers

public static int processAdditionaldentifiers(boolean processAllExistingIDs,
TableData myData,
ExperimentInterface md,
BackgroundTaskStatusProviderSupportingExternalCall optStatus,
double optStartProgress,
double optEndProgress,
StringBuilder statusMessage,
boolean skipFirstRow)

processAdditionaldentifiers

public static int processAdditionaldentifiers(boolean processAllExistingIDs,
boolean processAllNewIDs,
TableData myData,
ExperimentInterface md,
BackgroundTaskStatusProviderSupportingExternalCall optStatus,
double optStartProgress,
double optEndProgress,
StringBuilder statusMessage,
boolean skipFirstRow,
HashSet<Integer> ignoreColumns)

getAlternativeTableData

public static TableData getAlternativeTableData(ArrayList<String[][]> alternativeIDs)