Package de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.importers.sbml

Class SBML_Species_Reader

java.lang.Object

de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.importers.sbml.SBML_Species_Reader

public class SBML_Species_Reader
extends Object

Constructor Summary

Constructors

Constructor	Description
SBML_Species_Reader()

Method Summary

Modifier and Type	Method	Description
void	addSpecies(Graph g, org.sbml.jsbml.ListOf<org.sbml.jsbml.Species> speciesList, PositionGridGenerator pgg, SBMLSpeciesHelper specieshelper)	reads in species and is called from class SBML_XML_Reader.java.

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

SBML_Species_Reader

public SBML_Species_Reader()

Method Details

addSpecies

public void addSpecies(Graph g,
org.sbml.jsbml.ListOf<org.sbml.jsbml.Species> speciesList,
PositionGridGenerator pgg,
SBMLSpeciesHelper specieshelper)

reads in species and is called from class SBML_XML_Reader.java. The method adds species to the graph and to the node tab

Parameters:

g - the data structure for reading in the information

speciesList - contains the species for the import

pgg - is needed for drawing the graph