Uses of Class
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.kegg.KeggPathwayEntry
Package | Description |
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de.ipk_gatersleben.ag_nw.graffiti | |
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.kegg |
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Uses of KeggPathwayEntry in de.ipk_gatersleben.ag_nw.graffiti
Methods in de.ipk_gatersleben.ag_nw.graffiti with parameters of type KeggPathwayEntry Modifier and Type Method Description static Node
GraphHelperBio. addMapNode(Graph superGraph, KeggPathwayEntry kpe)
Method parameters in de.ipk_gatersleben.ag_nw.graffiti with type arguments of type KeggPathwayEntry Modifier and Type Method Description void
KeggSoapAndPathwayService. setOptions(String targetdirectory, ArrayList<KeggPathwayEntry> keggPathwayEntries, Color enzymeColor)
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Uses of KeggPathwayEntry in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.kegg
Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.kegg with parameters of type KeggPathwayEntry Modifier and Type Method Description static Graph
KeggService. getKeggPathwayGravistoGraph(KeggPathwayEntry myEntry, boolean showErrorMessages, Color enzymeColors)
static Graph
KeggService. getKeggPathwayGravistoGraph(KeggPathwayEntry myEntry, boolean showErrorMessages, Color enzymeColors, boolean includeMapNodes)
static boolean
KeggService. loadKeggPathwayIntoEditor(KeggPathwayEntry myEntry, Graph loadBlockingIntoThisGraph, Color enzymeColor, boolean separateClusters)
If loadBlockingIntoThisGraph is != null, this method adds the loaded graph to the given graph instance.static void
KeggService. loadPathway(KeggPathwayEntry myEntry, boolean processLabels)
static void
KeggService. loadPathway(KeggPathwayEntry myEntry, Graph targetGraph, boolean processLabels)
static void
KeggService. loadPathway(KeggPathwayEntry myEntry, Graph targetGraph, Node initialMapNode, boolean processLabels)
static void
KeggService. loadPathway(KeggPathwayEntry myEntry, Graph targetGraph, Node initialMapNode, boolean askForNewWindow, boolean separateClusters)
Method parameters in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.kegg with type arguments of type KeggPathwayEntry Modifier and Type Method Description void
KeggService. processKeggTree(JTree keggTree, HashMap<KeggPathwayEntry,DefaultMutableTreeNode> pathwayToTreeNodeMap)
Constructors in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.kegg with parameters of type KeggPathwayEntry Constructor Description KeggPathwayEntry(KeggPathwayEntry copyThisEntry, boolean colorEnzymesAndUseReferencePathway)