Uses of Interface
org.HelperClass

Packages that use HelperClass

Package	Description
de.ipk_gatersleben.ag_nw.graffiti
de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms
de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.som
de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.kegg
de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.kegg_reaction
de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.sib_enzymes
de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.transpath
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.database_processing.go_cluster_histogram
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.hierarchy
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.helper
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.info_dialog_dbe	Contains the Info Dialog for Database Editor and its helper.
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.launch_gui
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.dbe
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.helper_classes
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.kegg
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.workflow
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.viewcomponents
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.webstart
de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.database.dbe
de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.kgml
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.pattern_springembedder.clusterCommands
de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.add_attributes
de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.invert_selection
de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.label_editing
de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.pathway_references
de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.svg_exporter
de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.threading
de.ipk_gatersleben.ag_nw.graffiti.services
de.ipk_gatersleben.ag_nw.graffiti.services.network
de.ipk_gatersleben.ag_nw.graffiti.services.task
org
org.graffiti.editor	Contains classes for the famous graffiti editor.
org.graffiti.editor.actions	Contains the editor's action classes.
org.graffiti.plugin	Contains an interface and an adapter class for a generic plugin.
org.graffiti.plugin.algorithm
org.graffiti.plugins.ios.importers
org.graffiti.util	Contains utility classes for frequently needed functionality.
org.vanted	Overarching classes, such as preferences and build information.
scenario
vanted_feature

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti

Classes in de.ipk_gatersleben.ag_nw.graffiti that implement HelperClass

Modifier and Type	Class	Description
class	FileHelper	Created on 13/05/2004 Extended on 14/08/2015
class	GraphHelper	Graph Helper Class - A Collection of Helper routines for the work with graphs
class	GraphHelperBio
class	KeggSoapAndPathwayService
class	MyInputHelper

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms that implement HelperClass

Modifier and Type	Class	Description
class	ColorHelper

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.som

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.som that implement HelperClass

Modifier and Type	Class	Description
class	SOManalysis
class	SOMguiHelper

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.kegg

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.kegg that implement HelperClass

Modifier and Type	Class	Description
class	KeggAPIServiceHelper	This Kegg API Service helper will retrieve and cache results looked up from the Kegg public REST webservice.

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.kegg_reaction

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.kegg_reaction that implement HelperClass

Modifier and Type	Class	Description
class	ReactionService

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.sib_enzymes

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.sib_enzymes that implement HelperClass

Modifier and Type	Class	Description
class	EnzymeService

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.transpath

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.transpath that implement HelperClass

Modifier and Type	Class	Description
class	TranspathService

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe that implement HelperClass

Modifier and Type	Class	Description
class	ApplyAlternativeIdentifiersTo

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.database_processing.go_cluster_histogram

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.database_processing.go_cluster_histogram that implement HelperClass

Modifier and Type	Class	Description
class	ProcessHierarchynodesDepOnLeafNodes

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.hierarchy

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.hierarchy that implement HelperClass

Modifier and Type	Class	Description
class	HierarchyAlgorithms	Deprecated.

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools that implement HelperClass

Modifier and Type	Class	Description
class	ContextMenuHelper

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper

Subinterfaces of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper

Modifier and Type	Interface	Description
interface	SubstanceInterface

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper that implement HelperClass

Modifier and Type	Class	Description
class	EdgeHelper
class	GraphElementHelper
class	NodeHelper
class	Substance

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.helper

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.helper that implement HelperClass

Modifier and Type	Class	Description
class	DBEgravistoHelper
class	PatternGraffitiHelper

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.info_dialog_dbe

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.info_dialog_dbe that implement HelperClass

Modifier and Type	Class	Description
class	DatabaseFileStatusService
class	PluginInfoHelper

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.launch_gui

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.launch_gui that implement HelperClass

Modifier and Type	Class	Description
class	LaunchGui

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.dbe

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.dbe that implement HelperClass

Modifier and Type	Class	Description
class	OpenExcelFileDialogService
class	OpenMageFileDialogService

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.helper_classes

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.helper_classes that implement HelperClass

Modifier and Type	Class	Description
class	Experiment2GraphHelper
class	XPathHelper

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.kegg

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.kegg that implement HelperClass

Modifier and Type	Class	Description
class	KeggHelper	HTML Parser
class	KeggService

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.workflow

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.workflow that implement HelperClass

Modifier and Type	Class	Description
class	NewsHelper
class	PrettyObject
class	RSSFeedManager
class	WorkflowHelper	Deprecated. Since 2.7.0, it contains outdated information and has been moved to vanted.org, where an updated version can be found at the tutorials section.

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.viewcomponents

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.viewcomponents that implement HelperClass

Modifier and Type	Class	Description
class	EdgeComponentHelper

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.webstart

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.webstart that implement HelperClass

Modifier and Type	Class	Description
class	GravistoMainHelper

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.database.dbe

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.database.dbe that implement HelperClass

Modifier and Type	Class	Description
class	StringScanner

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.kgml

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.kgml that implement HelperClass

Modifier and Type	Class	Description
class	KeggGmlHelper

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.pattern_springembedder.clusterCommands

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.pattern_springembedder.clusterCommands that implement HelperClass

Modifier and Type	Class	Description
class	BendsLaunchGUI	Deprecated.
class	ClusterOverviewNetworkLaunchGui
class	CreateHierarchyTree	Deprecated.
class	MyClusterGraphBasedReLayoutService
class	SetClusterLaunchGui

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.add_attributes

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.add_attributes that implement HelperClass

Modifier and Type	Class	Description
class	ComputeAttributesAlgorithm

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.invert_selection

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.invert_selection that implement HelperClass

Modifier and Type	Class	Description
class	SearchAndSelecAlgorithm	Labels all selected nodes with unique numbers.
class	SearchAttributeHelper

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.label_editing

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.label_editing that implement HelperClass

Modifier and Type	Class	Description
class	ChangeLabelsAlgorithm	Deprecated.

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.pathway_references

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.pathway_references that implement HelperClass

Modifier and Type	Class	Description
class	LinkSelection

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.svg_exporter

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.svg_exporter that implement HelperClass

Modifier and Type	Class	Description
class	GraphicExport

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.threading

Classes in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.threading that implement HelperClass

Modifier and Type	Class	Description
class	SystemAnalysis

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.services

Classes in de.ipk_gatersleben.ag_nw.graffiti.services that implement HelperClass

Modifier and Type	Class	Description
class	AlgorithmServices

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.services.network

Classes in de.ipk_gatersleben.ag_nw.graffiti.services.network that implement HelperClass

Modifier and Type	Class	Description
class	BroadCastService	Creates a broadcast-service which allows sending and receiving of broadcast messages.

Uses of HelperClass in de.ipk_gatersleben.ag_nw.graffiti.services.task

Classes in de.ipk_gatersleben.ag_nw.graffiti.services.task that implement HelperClass

Modifier and Type	Class	Description
class	BackgroundTaskHelper	Used to easily let a long running task running in background, with the possibility to provide a feedback of the progress,
class	ProgressStatusService

Uses of HelperClass in org

Classes in org that implement HelperClass

Modifier and Type	Class	Description
class	AttributeHelper	Attribute Helper Class - Makes it more easy to work with graph/node attributes.
class	Colors
class	ErrorMsg
class	HomeFolder
class	ObjectAttributeService
class	ObjectRef
class	OpenFileDialogService
class	ReleaseInfo
class	SettingsHelperDefaultIsFalse
class	SettingsHelperDefaultIsTrue
class	StringManipulationTools
class	SystemInfo

Uses of HelperClass in org.graffiti.editor

Classes in org.graffiti.editor that implement HelperClass

Modifier and Type	Class	Description
class	GravistoService	Provides access to global variables, needed for various extensions to Graffiti.

Uses of HelperClass in org.graffiti.editor.actions

Classes in org.graffiti.editor.actions that implement HelperClass

Modifier and Type	Class	Description
class	ClipboardService

Uses of HelperClass in org.graffiti.plugin

Classes in org.graffiti.plugin that implement HelperClass

Modifier and Type	Class	Description
class	ToolTipHelper
class	XMLHelper	Contains some (static) auxiliary methods for writing XML.

Uses of HelperClass in org.graffiti.plugin.algorithm

Classes in org.graffiti.plugin.algorithm that implement HelperClass

Modifier and Type	Class	Description
class	ThreadSafeOptions	This class can be used for thread safe communication between user interfaces and plugins.

Uses of HelperClass in org.graffiti.plugins.ios.importers

Classes in org.graffiti.plugins.ios.importers that implement HelperClass

Modifier and Type	Class	Description
class	TypedAttributeService

Uses of HelperClass in org.graffiti.util

Classes in org.graffiti.util that implement HelperClass

Modifier and Type	Class	Description
class	GeneralUtils
class	GraphicHelper
class	PluginHelper

Uses of HelperClass in org.vanted

Classes in org.vanted that implement HelperClass

Modifier and Type	Class	Description
class	BuildInfo	A utility helper for accessing build information.

Uses of HelperClass in scenario

Subinterfaces of HelperClass in scenario

Modifier and Type	Interface	Description
interface	ScenarioServiceHandlesStoredParametersOption
interface	ScenarioServiceIgnoreAlgorithm

Classes in scenario that implement HelperClass

Modifier and Type	Class	Description
class	ScenarioService

Uses of HelperClass in vanted_feature

Classes in vanted_feature that implement HelperClass

Modifier and Type	Class	Description
class	SelectAlgorithm	Deprecated.