Package de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.biopax.lvl3utility

Class StoichiometryWriter

java.lang.Object

de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.biopax.HelperClass

de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.biopax.lvl3utility.StoichiometryWriter

public class StoichiometryWriter
extends HelperClass

writes on one edge a Stochiometry and reads it again

Author:

ricardo

Constructor Summary

Constructors

Constructor	Description
StoichiometryWriter()

Method Summary

Modifier and Type	Method	Description
void	readParticipantStoichiometry(org.biopax.paxtools.model.level3.PhysicalEntity phys, org.biopax.paxtools.model.level3.Conversion interaction, Edge edge, org.biopax.paxtools.model.Model model)
void	writeParticipantStoichiometry(Node physicalEntityNode, Node reactionNode, Edge e, Set<org.biopax.paxtools.model.level3.Stoichiometry> Stoichiometry)

Methods inherited from class de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.biopax.HelperClass

returnAttributeByPath, returnAttributeByPath

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

StoichiometryWriter

public StoichiometryWriter()

Method Details

writeParticipantStoichiometry

public void writeParticipantStoichiometry(Node physicalEntityNode,
Node reactionNode,
Edge e,
Set<org.biopax.paxtools.model.level3.Stoichiometry> Stoichiometry)

readParticipantStoichiometry

public void readParticipantStoichiometry(org.biopax.paxtools.model.level3.PhysicalEntity phys,
org.biopax.paxtools.model.level3.Conversion interaction,
Edge edge,
org.biopax.paxtools.model.Model model)