Package de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.biopax.lvl3utility
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Class Summary Class Description StoichiometryWriter writes on one edge a Stochiometry and reads it againTreeAttributSearcher enumerates the attributes of the given node / attributable in a path --> attribute mapUBioChemicalReaction UCatalysis UComplex UComplexAssembly UControl UConversion UDegradation UDna UDnaRegion UGene UGeneticInteraction UModulation UMolecularInteraction UPathway UPhysicalEntity UProtein URna URnaRegion USmallMolecule UTemplateReaction UTemplateReactionRegulation UtilityClassSelectorFromGraph this class and its static method transforms a attributes on a node to an biopax elementUtilityClassSelectorToGraph this class and its static method transforms a biopax element to a node in a graphUtilitySuperClassFromGraph this class's functions gets all available attributes and helps to write them into an owl modelUtilitySuperClassToGraph this class's functions sets attributes to each nodeUTransport UTransportWithBiochemicalReaction