Package de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.biopax

Class HelperClass

java.lang.Object

de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.biopax.HelperClass

Direct Known Subclasses:

BioPAX_OWL_Writer, BPinteraction, BPInteraction, PathWayHandler, PathWayHandler, PathWayLoaderLvL2, PathWayLoaderLvL3, StoichiometryWriter, StoichiometryWriter, UtilityClassSelectorFromGraph, UtilitySuperClassFromGraph, UtilitySuperClassToGraph, UtilitySuperClassToGraph

public class HelperClass
extends Object

Helps to set and get Attributes on Nodes and Edges. It can work with single attributes, list of attributes and lists of list-attributes.

Author:

ricardo

Constructor Summary

Constructors

Constructor	Description
HelperClass()

Method Summary

Modifier and Type	Method	Description
static void	returnAttributeByPath(GraphElement elem, Pattern pattern, ArrayList<Attribute> set)	finds Attributes in GraphElements
static void	returnAttributeByPath(Graph elem, Pattern pattern, ArrayList<Attribute> set)	written by Hendrik Mehlhorn it is looking for all attributes that match a specific pattern and putting the result into the set passed into the function

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

HelperClass

public HelperClass()

Method Details

returnAttributeByPath

public static void returnAttributeByPath(Graph elem,
Pattern pattern,
ArrayList<Attribute> set)

written by Hendrik Mehlhorn it is looking for all attributes that match a specific pattern and putting the result into the set passed into the function

Parameters:

elem -

pattern -

set -

returnAttributeByPath

public static void returnAttributeByPath(GraphElement elem,
Pattern pattern,
ArrayList<Attribute> set)

finds Attributes in GraphElements

Parameters:

elem - GraphElement to be read

pattern - Attribute that is looked for

set - gets filled if Attribute was found