Uses of Class
org.graffiti.plugin.algorithm.PreconditionException

Packages that use PreconditionException

Package	Description
de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.circle_search
de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.davidtest
de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.graph_generation
de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.hamming_distance	Provides the HammingDistancePlugin, a plugin for computing the hamming distances between graphs.
de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.lines_as_substances
de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.naive_pattern_finder	Provides the NaivePatternFinderPlugin, a plugin for finding given patterns within a given graph.
de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.ratioview
de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.shortest_paths
de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.som
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.algorithms
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.database_processing.go
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.database_processing.go_cluster_histogram
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.database_processing.kegg_reaction
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.selectCommands
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.kegg_bar
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.set_background_color
de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.startlayout
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.apply_from_graph
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.circle
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.connected_components
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.copy_pattern_layout
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.expand_no_overlapp
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.fd_edge_routing
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.fish_eye
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.graph_to_origin_mover
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.grid	Provides the GridLayouterPlugin, a plugin for placing nodes on a grid.
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.grid_placement
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.no_overlapp_as_tim
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.pattern_springembedder
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.pattern_springembedder.clusterCommands
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.radial_tree
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.random
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.resize_and_grid_layout	Provides the GridLayouterPlugin, a plugin for placing nodes on a grid.
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.rt_tree
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.springembedder_1
de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.tree_simple
de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.hierarchy
de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.invert_selection
de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.pathway_references
de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.print.printer
de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.process_alternative_ids
de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.scripting
de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.svg_exporter
org.graffiti.plugin.algorithm
org.vanted.plugins.layout.adaptagrams.edgerouting
org.vanted.plugins.layout.multilevelframework	A layout algorithm to Vanted that implements the multi-level graph layout framework.
org.vanted.plugins.layout.stressminimization	A layout algorithm to Vanted that implements stress minimization.

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.circle_search

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.circle_search that throw PreconditionException

Modifier and Type	Method	Description
void	CircleSearchAndLayoutAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.davidtest

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.davidtest that throw PreconditionException

Modifier and Type	Method	Description
void	ColorizeAlgorithm.check()
void	DavidTestAlgorithm.check()
void	GrubbsTestAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.graph_generation

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.graph_generation that throw PreconditionException

Modifier and Type	Method	Description
void	BarabasiAlbertGraphGenerator.check()
void	ErdosRenyiGraphGenerator.check()
void	WattsStrogatzGraphGenerator.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.hamming_distance

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.hamming_distance that throw PreconditionException

Modifier and Type	Method	Description
void	HammingDistanceAlgorithm.check()	Checks the preconditions of the algorithm.

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.lines_as_substances

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.lines_as_substances that throw PreconditionException

Modifier and Type	Method	Description
void	LinesToSubstancesAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.naive_pattern_finder

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.naive_pattern_finder that throw PreconditionException

Modifier and Type	Method	Description
void	NaivePatternFinderAlgorithm.check()	Checks the preconditions of the algorithm.

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.ratioview

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.ratioview that throw PreconditionException

Modifier and Type	Method	Description
void	ExchangeNodePositionsAlgorithm.check()
void	RatioViewAlgorithm.check()
void	SubstanceRatioCalculationAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.shortest_paths

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.shortest_paths that throw PreconditionException

Modifier and Type	Method	Description
void	ShortestPathSelectionAlgorithm.check()
void	WeightedShortestPathSelectionAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.som

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.som that throw PreconditionException

Modifier and Type	Method	Description
void	MultiDataView.check()
void	SOMclusterAnalysis.check()
void	SOMclusterAnalysisDoCluster.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe that throw PreconditionException

Modifier and Type	Method	Description
void	CombineMappingData.check()
void	ReplaceDiagramTitleFromAlternativeSubstanceNames.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.algorithms

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.algorithms that throw PreconditionException

Modifier and Type	Method	Description
void	AddDiagramLegendAlgorithm.check()
void	ColorScaleLegendAlgorithm.check()
void	ExtractMappingDataAlgorithm.check()
void	RemoveMappingDataAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.database_processing.go

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.database_processing.go that throw PreconditionException

Modifier and Type	Method	Description
void	CreateGOtreeAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.database_processing.go_cluster_histogram

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.database_processing.go_cluster_histogram that throw PreconditionException

Modifier and Type	Method	Description
void	ClusterHistogramFisherTest.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.database_processing.kegg_reaction

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.database_processing.kegg_reaction that throw PreconditionException

Modifier and Type	Method	Description
void	CreateKeggReactionNetworkAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.selectCommands

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.selectCommands that throw PreconditionException

Modifier and Type	Method	Description
void	SelectCompoundsAlgorithm.check()
void	SelectEdgesAlgorithm.check()
void	SelectEnzymesAlgorithm.check()
void	SelectGenesAlgorithm.check()
void	SelectMapNodesAlgorithm.check()
void	SelectMapTitleNodesAlgorithm.check()
void	SelectNodesWithExperimentalDataAlgorithm.check()
void	SelectReactionsAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools that throw PreconditionException

Modifier and Type	Method	Description
void	CloseAllWindows.check()
void	EvaluateKGML.check()
void	RecreateView.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.kegg_bar

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.kegg_bar that throw PreconditionException

Modifier and Type	Method	Description
void	ColorizeSuperGraphAlgorithm.check()
void	CreateOrgSpecificSuperGraphsAlgorithm.check()
void	SelectWindowsAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.set_background_color

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.set_background_color that throw PreconditionException

Modifier and Type	Method	Description
void	WindowSettings.check()	DOCTODO: Include method header

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.startlayout

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.startlayout that throw PreconditionException

Modifier and Type	Method	Description
void	StartLayoutAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.apply_from_graph

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.apply_from_graph that throw PreconditionException

Modifier and Type	Method	Description
void	ApplyGraphLayout.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.circle

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.circle that throw PreconditionException

Modifier and Type	Method	Description
void	CircleLayouterAlgorithm.check()	Checks, if a graph was given and that the radius is positive.
void	CircleLayouterWithMinimumCrossingsAlgorithm.check()	Checks, if a graph was given and that the radius is positive.
void	DotLayoutAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.connected_components

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.connected_components that throw PreconditionException

Modifier and Type	Method	Description
void	ConnectedComponentLayout.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.copy_pattern_layout

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.copy_pattern_layout that throw PreconditionException

Modifier and Type	Method	Description
void	CopyPatternLayoutAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.expand_no_overlapp

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.expand_no_overlapp that throw PreconditionException

Modifier and Type	Method	Description
void	NoOverlappLayoutAlgorithm.check()	Checks, if a graph was given and that the radius is positive.

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.fd_edge_routing

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.fd_edge_routing that throw PreconditionException

Modifier and Type	Method	Description
void	ForceDirectedEdgeLayout.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.fish_eye

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.fish_eye that throw PreconditionException

Modifier and Type	Method	Description
void	FishEyeLayout.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.graph_to_origin_mover

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.graph_to_origin_mover that throw PreconditionException

Modifier and Type	Method	Description
void	CenterLayouterAlgorithm.check()	DOCTODO: Include method header
void	NoOverlappOfClustersAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.grid

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.grid that throw PreconditionException

Modifier and Type	Method	Description
void	GridLayouterAlgorithm.check()	Checks parameters

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.grid_placement

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.grid_placement that throw PreconditionException

Modifier and Type	Method	Description
void	GridPlacementAlgorithm.check()	Checks, if a graph was given.

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.no_overlapp_as_tim

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.no_overlapp_as_tim that throw PreconditionException

Modifier and Type	Method	Description
void	NoOverlappLayoutAlgorithmAS.check()	Checks, if a graph was given and that the radius is positive.

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.pattern_springembedder

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.pattern_springembedder that throw PreconditionException

Modifier and Type	Method	Description
void	PatternSpringembedder.check()	Error Checking
void	PatternSpringembedder3d.check()	Error Checking

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.pattern_springembedder.clusterCommands

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.pattern_springembedder.clusterCommands that throw PreconditionException

Modifier and Type	Method	Description
void	BringToFrontOrBackAlgorithm.check()
void	BundleParallelEdges.check()
void	ClusterGraphLayout.check()
void	ClusterIndividualLayout.check()
void	DuplicateEdge.check()
void	IntroduceBendsAlgorithm.check()
void	IntroduceParallelEdgeBends.check()
void	IntroduceSelfEdgeBends.check()
void	PajekClusterColor.check()
void	RemoveBendsAlgorithm.check()
void	RemoveParallelEdges.check()
void	ResetEdgeSourceOrTarget.check()
void	ResizeNodesDepDegreeAlgorithm.check()
void	SelectClusterAlgorithm.check()
void	SetClusterInfoAlgorithm.check()
void	SetClusterInfoFromLabelAlgorithm.check()
void	SetClusterInfoFromSubgraphAlgorithm.check()
void	ShowClusterGraphAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.radial_tree

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.radial_tree that throw PreconditionException

Modifier and Type	Method	Description
void	RadialTreeLayout.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.random

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.random that throw PreconditionException

Modifier and Type	Method	Description
void	RandomLayouterAlgorithm.check()	Checks, if a graph was given.

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.resize_and_grid_layout

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.resize_and_grid_layout that throw PreconditionException

Modifier and Type	Method	Description
void	ArrayLayout.check()
void	GridLayoutAlgorithm.check()
void	ResizeFromMappingCountLayoutAlgorithm.check()	Checks parameters

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.rt_tree

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.rt_tree that throw PreconditionException

Modifier and Type	Method	Description
void	RTTreeLayout.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.springembedder_1

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.springembedder_1 that throw PreconditionException

Modifier and Type	Method	Description
void	SpringEmbedderAlgorithm.check()	Error Checking

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.tree_simple

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.tree_simple that throw PreconditionException

Modifier and Type	Method	Description
void	GraphTreeLayout.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.hierarchy

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.hierarchy that throw PreconditionException

Modifier and Type	Method	Description
void	HideOrShowChildNodes.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.invert_selection

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.invert_selection that throw PreconditionException

Modifier and Type	Method	Description
void	RemoveSelectedNodesPreserveEdgesAlgorithm.check()
void	SetToolTipAlgorithm.check()
void	SetURLAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.pathway_references

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.pathway_references that throw PreconditionException

Modifier and Type	Method	Description
void	PathwayReferenceAlgorithm.check()
void	PathwayReferenceAutoCreationAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.print.printer

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.print.printer that throw PreconditionException

Modifier and Type	Method	Description
void	PrintAlgorithm.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.process_alternative_ids

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.process_alternative_ids that throw PreconditionException

Modifier and Type	Method	Description
void	ReplaceLabelFromAlternativeSubstanceNames.check()

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.scripting

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.scripting that throw PreconditionException

Modifier and Type	Method	Description
void	BeanShellDesktopAlgorithm.check()	No special checks implemented.

Uses of PreconditionException in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.svg_exporter

Methods in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.svg_exporter that throw PreconditionException

Modifier and Type	Method	Description
void	PDFAlgorithm.check()	Unused for this plugin.
void	PngJpegAlgorithm.check()
void	SVGAlgorithm.check()	Unused for this plugin.
static void	PngJpegAlgorithm.checkZoom()
static void	SVGAlgorithm.checkZoom()

Uses of PreconditionException in org.graffiti.plugin.algorithm

Methods in org.graffiti.plugin.algorithm that throw PreconditionException

Modifier and Type	Method	Description
void	AbstractAlgorithm.check()
void	Algorithm.check()	Checks whether all preconditions of the current graph are satisfied.

Uses of PreconditionException in org.vanted.plugins.layout.adaptagrams.edgerouting

Methods in org.vanted.plugins.layout.adaptagrams.edgerouting that throw PreconditionException

Modifier and Type	Method	Description
void	EdgeRoutingAlgorithm.check()	Check preconditions: (1) a graph with edges, (2) native layout library can be loaded.

Uses of PreconditionException in org.vanted.plugins.layout.multilevelframework

Methods in org.vanted.plugins.layout.multilevelframework that throw PreconditionException

Modifier and Type	Method	Description
void	ForceDirectedLayoutWrapper.check()
void	MultilevelFrameworkLayout.check()	Checks, if a graph was given and that the radius is positive.

Uses of PreconditionException in org.vanted.plugins.layout.stressminimization

Methods in org.vanted.plugins.layout.stressminimization that throw PreconditionException

Modifier and Type	Method	Description
void	BackgroundExecutionAlgorithm.check()
void	StressMinimizationLayout.check()	Checks whether all preconditions of the current graph are satisfied.