All Superinterfaces:: AttributeValuePairSupport, Collection<SampleInterface>, Comparable<ConditionInterface>, Iterable<SampleInterface>, MappingDataEntity, Set<SampleInterface>

All Known Implementing Classes:: Condition

public interface ConditionInterface
extends MappingDataEntity, Comparable<ConditionInterface>, Set<SampleInterface>

Field Summary

Fields inherited from interface de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.MappingDataEntity
ANNO_DIV

Method Summary

Modifier and Type	Method	Description
`boolean`	`add(SampleInterface arg0)`
`boolean`	`addAll(Collection<? extends SampleInterface> arg0)`
`SampleInterface`	`addAndMerge(SampleInterface samplenew)`
`double`	`calcAlpha()`
`double`	`calcBeta()`
`void`	`clear()`
`ConditionInterface`	`clone(SubstanceInterface parent)`
`int`	`compareTo(ConditionInterface otherSeries)`
`boolean`	`contains(Object arg0)`
`boolean`	`containsAll(Collection<?> arg0)`
`boolean`	`equals(Object obj)`
`void`	`fillAttributeMap(Map<String,Object> attributeValueMap)`
`int`	`getConditionId()`
`String`	`getConditionName()`
`String`	`getCoordinator()`
`String`	`getDatabase()`
`String`	`getExpAndConditionName()`
`String`	`getExperimentCoordinator()`
`String`	`getExperimentDatabaseId()`
`ExperimentHeaderInterface`	`getExperimentHeader()`
`void`	`getExperimentHeader(StringBuilder r, int measurementcount)`
`Date`	`getExperimentImportdate()`
`String`	`getExperimentName()`
`String`	`getExperimentRemark()`
`Date`	`getExperimentStartDate()`
`String`	`getExperimentType()`
`String`	`getGenotype()`
`String`	`getGrowthconditions()`
`ArrayList<MyComparableDataPoint>`	`getMCDPs()`
`Collection<MyComparableDataPoint>`	`getMeanMCDPs()`
`ArrayList<Integer>`	`getMeanTimePoints()`
`ArrayList<String>`	`getMeanTimeUnits()`
`ArrayList<Double>`	`getMeanValues()`
`String`	`getName()`
`SubstanceInterface`	`getParentSubstance()`
`int`	`getRowId()`
`String`	`getSequence()`
`int`	`getSeriesId()`
`String`	`getSpecies()`
`void`	`getString(StringBuilder r)`
`void`	`getStringForDocument(StringBuilder r)`
`void`	`getStringOfChildren(StringBuilder r)`
`void`	`getTimes(Set<Integer> times)`
`String`	`getTreatment()`
`String`	`getVariety()`
`void`	`getXMLAttributeString(StringBuilder r)`
`void`	`getXMLAttributeStringForDocument(StringBuilder r)`
`int`	`hashCode()`
`boolean`	`isEmpty()`
`Iterator<SampleInterface>`	`iterator()`
`boolean`	`remove(Object arg0)`
`boolean`	`removeAll(Collection<?> arg0)`
`boolean`	`retainAll(Collection<?> arg0)`
`void`	`setAttribute(org.jdom2.Attribute attr)`
`boolean`	`setData(org.jdom2.Element condition)`
`boolean`	`setData(org.jdom2.Element conditionElement, org.jdom2.Element experimentChildElement)`
`void`	`setDatabase(String database)`
`void`	`setDataOfChildElement(org.jdom2.Element childElement)`
`void`	`setExperimentCoordinator(String experimentCoordinator)`
`void`	`setExperimentDatabaseId(String databaseId)`
`void`	`setExperimentImportdate(Date experimentimportdate)`
`void`	`setExperimentInfo(ExperimentHeaderInterface header)`
`void`	`setExperimentName(String experimentName)`
`void`	`setExperimentRemark(String experimentRemark)`
`void`	`setExperimentStartDate(Date experimentStartDate)`
`void`	`setExperimentType(String experimenttype)`
`void`	`setGenotype(String genotype)`
`void`	`setGrowthconditions(String growthconditions)`
`void`	`setParent(SubstanceInterface md)`
`void`	`setRowId(int rowId)`
`void`	`setSequence(String sequence)`
`void`	`setSpecies(String species)`
`void`	`setTreatment(String treatment)`
`void`	`setVariety(String variety)`
`int`	`size()`
`Object[]`	`toArray()`
`<T> T[]`	`toArray(T[] arg0)`
`String`	`toString()`

Methods inherited from interface java.util.Collection

parallelStream, removeIf, stream, toArray

Methods inherited from interface java.lang.Iterable

forEach

Methods inherited from interface java.util.Set

spliterator

Method Details
- getString
  
  void getString(StringBuilder r)
- getXMLAttributeString
  
  void getXMLAttributeString(StringBuilder r)
  
  Specified by:
  
  getXMLAttributeString in interface MappingDataEntity
- getStringOfChildren
  
  void getStringOfChildren(StringBuilder r)
  
  Specified by:
  
  getStringOfChildren in interface MappingDataEntity
- getExpAndConditionName
  
  String getExpAndConditionName()
- toString
  
  String toString()
  
  Overrides:
  
  toString in class Object
- getConditionName
  
  String getConditionName()
- getTimes
  
  void getTimes(Set<Integer> times)
- getExperimentName
  
  String getExperimentName()
- getDatabase
  
  String getDatabase()
- getCoordinator
  
  String getCoordinator()
- getExperimentStartDate
  
  Date getExperimentStartDate()
- getConditionId
  
  int getConditionId()
- getMeanMCDPs
  
  Collection<MyComparableDataPoint> getMeanMCDPs()
- getMCDPs
  
  ArrayList<MyComparableDataPoint> getMCDPs()
- getMeanValues
  
  ArrayList<Double> getMeanValues()
- getMeanTimePoints
  
  ArrayList<Integer> getMeanTimePoints()
- getMeanTimeUnits
  
  ArrayList<String> getMeanTimeUnits()
- calcAlpha
  
  double calcAlpha()
- calcBeta
  
  double calcBeta()
- getSpecies
  
  String getSpecies()
- getGenotype
  
  String getGenotype()
- getTreatment
  
  String getTreatment()
- getSeriesId
  
  int getSeriesId()
- setData
  
  boolean setData(org.jdom2.Element condition)
  
  Specified by:
  
  setData in interface MappingDataEntity
- setData
  
  boolean setData(org.jdom2.Element conditionElement, org.jdom2.Element experimentChildElement)
- getName
  
  String getName()
- setAttribute
  
  void setAttribute(org.jdom2.Attribute attr)
  
  Specified by:
  
  setAttribute in interface MappingDataEntity
- setDataOfChildElement
  
  void setDataOfChildElement(org.jdom2.Element childElement)
  
  Specified by:
  
  setDataOfChildElement in interface MappingDataEntity
- setExperimentName
  
  void setExperimentName(String experimentName)
- setDatabase
  
  void setDatabase(String database)
- setExperimentCoordinator
  
  void setExperimentCoordinator(String experimentCoordinator)
- getExperimentCoordinator
  
  String getExperimentCoordinator()
- setExperimentStartDate
  
  void setExperimentStartDate(Date experimentStartDate)
- setSpecies
  
  void setSpecies(String species)
- setGenotype
  
  void setGenotype(String genotype)
- setGrowthconditions
  
  void setGrowthconditions(String growthconditions)
- getGrowthconditions
  
  String getGrowthconditions()
- setTreatment
  
  void setTreatment(String treatment)
- getExperimentType
  
  String getExperimentType()
- getSequence
  
  String getSequence()
- setVariety
  
  void setVariety(String variety)
- getVariety
  
  String getVariety()
- setExperimentType
  
  void setExperimentType(String experimenttype)
- setSequence
  
  void setSequence(String sequence)
- getExperimentHeader
  
  void getExperimentHeader(StringBuilder r, int measurementcount)
- getParentSubstance
  
  SubstanceInterface getParentSubstance()
- getXMLAttributeStringForDocument
  
  void getXMLAttributeStringForDocument(StringBuilder r)
- getStringForDocument
  
  void getStringForDocument(StringBuilder r)
- compareTo
  
  int compareTo(ConditionInterface otherSeries)
  
  Specified by:
  
  compareTo in interface Comparable<ConditionInterface>
- setRowId
  
  void setRowId(int rowId)
- getRowId
  
  int getRowId()
- setExperimentImportdate
  
  void setExperimentImportdate(Date experimentimportdate)
- getExperimentImportdate
  
  Date getExperimentImportdate()
- setExperimentRemark
  
  void setExperimentRemark(String experimentRemark)
- setExperimentDatabaseId
  
  void setExperimentDatabaseId(String databaseId)
- getExperimentDatabaseId
  
  String getExperimentDatabaseId()
- getExperimentRemark
  
  String getExperimentRemark()
- addAndMerge
  
  SampleInterface addAndMerge(SampleInterface samplenew)
- setParent
  
  void setParent(SubstanceInterface md)
- setExperimentInfo
  
  void setExperimentInfo(ExperimentHeaderInterface header)
- getExperimentHeader
  
  ExperimentHeaderInterface getExperimentHeader()
- add
  
  boolean add(SampleInterface arg0)
  
  Specified by:
  
  add in interface Collection<SampleInterface>
  
  Specified by:
  
  add in interface Set<SampleInterface>
- addAll
  
  boolean addAll(Collection<? extends SampleInterface> arg0)
  
  Specified by:
  
  addAll in interface Collection<SampleInterface>
  
  Specified by:
  
  addAll in interface Set<SampleInterface>
- clear
  
  void clear()
  
  Specified by:
  
  clear in interface Collection<SampleInterface>
  
  Specified by:
  
  clear in interface Set<SampleInterface>
- contains
  
  boolean contains(Object arg0)
  
  Specified by:
  
  contains in interface Collection<SampleInterface>
  
  Specified by:
  
  contains in interface Set<SampleInterface>
- containsAll
  
  boolean containsAll(Collection<?> arg0)
  
  Specified by:
  
  containsAll in interface Collection<SampleInterface>
  
  Specified by:
  
  containsAll in interface Set<SampleInterface>
- isEmpty
  
  boolean isEmpty()
  
  Specified by:
  
  isEmpty in interface Collection<SampleInterface>
  
  Specified by:
  
  isEmpty in interface Set<SampleInterface>
- remove
  
  boolean remove(Object arg0)
  
  Specified by:
  
  remove in interface Collection<SampleInterface>
  
  Specified by:
  
  remove in interface Set<SampleInterface>
- removeAll
  
  boolean removeAll(Collection<?> arg0)
  
  Specified by:
  
  removeAll in interface Collection<SampleInterface>
  
  Specified by:
  
  removeAll in interface Set<SampleInterface>
- retainAll
  
  boolean retainAll(Collection<?> arg0)
  
  Specified by:
  
  retainAll in interface Collection<SampleInterface>
  
  Specified by:
  
  retainAll in interface Set<SampleInterface>
- size
  
  int size()
  
  Specified by:
  
  size in interface Collection<SampleInterface>
  
  Specified by:
  
  size in interface Set<SampleInterface>
- toArray
  
  Object[] toArray()
  
  Specified by:
  
  toArray in interface Collection<SampleInterface>
  
  Specified by:
  
  toArray in interface Set<SampleInterface>
- toArray
  
  <T> T[] toArray(T[] arg0)
  
  Specified by:
  
  toArray in interface Collection<SampleInterface>
  
  Specified by:
  
  toArray in interface Set<SampleInterface>
- iterator
  
  Iterator<SampleInterface> iterator()
  
  Specified by:
  
  iterator in interface Collection<SampleInterface>
  
  Specified by:
  
  iterator in interface Iterable<SampleInterface>
  
  Specified by:
  
  iterator in interface Set<SampleInterface>
- fillAttributeMap
  
  void fillAttributeMap(Map<String,Object> attributeValueMap)
  
  Specified by:
  
  fillAttributeMap in interface AttributeValuePairSupport
- equals
  
  boolean equals(Object obj)
  
  Specified by:
  
  equals in interface Collection<SampleInterface>
  
  Specified by:
  
  equals in interface Set<SampleInterface>
  
  Overrides:
  
  equals in class Object
- hashCode
  
  int hashCode()
  
  Specified by:
  
  hashCode in interface Collection<SampleInterface>
  
  Specified by:
  
  hashCode in interface Set<SampleInterface>
  
  Overrides:
  
  hashCode in class Object
- clone
  
  ConditionInterface clone(SubstanceInterface parent)

Interface ConditionInterface

Field Summary

Fields inherited from interface de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.MappingDataEntity

Method Summary

Methods inherited from interface java.util.Collection

Methods inherited from interface java.lang.Iterable

Methods inherited from interface java.util.Set

Method Details

getString

getXMLAttributeString

getStringOfChildren

getExpAndConditionName

toString

getConditionName

getTimes

getExperimentName

getDatabase

getCoordinator

getExperimentStartDate

getConditionId

getMeanMCDPs

getMCDPs

getMeanValues

getMeanTimePoints

getMeanTimeUnits

calcAlpha

calcBeta

getSpecies

getGenotype

getTreatment

getSeriesId

setData

setData

getName

setAttribute

setDataOfChildElement

setExperimentName

setDatabase

setExperimentCoordinator

getExperimentCoordinator

setExperimentStartDate

setSpecies

setGenotype

setGrowthconditions

getGrowthconditions

setTreatment

getExperimentType

getSequence

setVariety

getVariety

setExperimentType

setSequence

getExperimentHeader

getParentSubstance

getXMLAttributeStringForDocument

getStringForDocument

compareTo

setRowId

getRowId

setExperimentImportdate

getExperimentImportdate

setExperimentRemark

setExperimentDatabaseId

getExperimentDatabaseId

getExperimentRemark

addAndMerge

setParent

setExperimentInfo

getExperimentHeader

add

addAll

clear

contains

containsAll

isEmpty

remove

removeAll

retainAll

size

toArray