F-Index (Vanted 2.8.3 API)

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F

FAST - org.graffiti.plugins.views.defaults.DrawMode
FAST - Static variable in class de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.sbml.SBML_Constants
FastScatterPlot - Class in org.jfree.chart.plot: A fast scatter plot.
FastScatterPlot() - Constructor for class org.jfree.chart.plot.FastScatterPlot: Creates an empty plot.
FastScatterPlot(float[][], ValueAxis, ValueAxis) - Constructor for class org.jfree.chart.plot.FastScatterPlot: Creates a new fast scatter plot.
FastScatterPlotDemo - Class in org.jfree.chart.demo: A demo of the fast scatter plot.
FastScatterPlotDemo(String) - Constructor for class org.jfree.chart.demo.FastScatterPlotDemo: Creates a new fast scatter plot demo.
FastView - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.fast_view
FastView() - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.fast_view.FastView
FastViewPlugin - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.fast_view
FastViewPlugin() - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.fast_view.FastViewPlugin
fatalError(SAXParseException) - Method in class org.graffiti.managers.pluginmgr.PluginXMLParserErrorHandler: Fatal Error Event Handler.
FeatureSet - Enum in org
FEED - de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.workflow.FeedDownloadType
FeedDownloadType - Enum in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.workflow
fetchData() - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.biomodels.RestApiBiomodels
FieldAlreadySetException - Exception in org.graffiti.attributes: The FieldAlreadySetException will be thrown if setAttributable() of setParent() is invoked on an attribute where theses fields are not null anymore.
FieldAlreadySetException(String) - Constructor for exception org.graffiti.attributes.FieldAlreadySetException: Constructs an FieldAlreadySetException with the specified detail message.
FIFTEEN_MINUTE_SEGMENT_SIZE - Static variable in class org.jfree.chart.axis.SegmentedTimeline: Defines a 15-minute segment size in ms.
fileClose - Variable in class org.graffiti.editor.MainFrame: The main frame's static actions
FileCloseAction - Class in org.graffiti.editor.actions: The action for closing a graph.
FileCloseAction(MainFrame) - Constructor for class org.graffiti.editor.actions.FileCloseAction: Creates a new FileCloseAction object.
FileDownloadCache - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.kegg
FileDownloadCache() - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.kegg.FileDownloadCache
FileDownloadStatusInformationProvider - Interface in de.ipk_gatersleben.ag_nw.graffiti.plugins.databases
FileDrop - Class in net.iharder.dnd: This class makes it easy to drag and drop files from the operating system to a Java program.
FileDrop(Component, boolean, FileDrop.Listener) - Constructor for class net.iharder.dnd.FileDrop: Constructor with a default border and the option to recursively set drop targets.
FileDrop(Component, Border, boolean, FileDrop.Listener) - Constructor for class net.iharder.dnd.FileDrop: Constructor with a specified border and the option to recursively set drop targets.
FileDrop(Component, Border, FileDrop.Listener) - Constructor for class net.iharder.dnd.FileDrop: Constructor with a specified border
FileDrop(Component, FileDrop.Listener) - Constructor for class net.iharder.dnd.FileDrop: Constructs a FileDrop with a default light-blue border and, if c is a Container, recursively sets all elements contained within as drop targets, though only the top level container will change borders.
FileDrop(Component, FileDrop.Listener, Runnable, Runnable) - Constructor for class net.iharder.dnd.FileDrop
FileDrop(PrintStream, Component, boolean, FileDrop.Listener) - Constructor for class net.iharder.dnd.FileDrop: Constructor with a default border, debugging optionally turned on and the option to recursively set drop targets.
FileDrop(PrintStream, Component, Border, boolean, FileDrop.Listener, Runnable, Runnable) - Constructor for class net.iharder.dnd.FileDrop: Full constructor with a specified border and debugging optionally turned on.
FileDrop(PrintStream, Component, Border, FileDrop.Listener) - Constructor for class net.iharder.dnd.FileDrop: Constructor with a specified border and debugging optionally turned on.
FileDrop(PrintStream, Component, FileDrop.Listener) - Constructor for class net.iharder.dnd.FileDrop: Constructor with a default border and debugging optionally turned on.
FileDrop.Listener - Interface in net.iharder.dnd: Implement this inner interface to listen for when files are dropped.
FileDropBean - Class in net.iharder.dnd: If you wish to use the FileDrop package as a JavaBean, this class will act as an interface to the FileDrop class that handles all the dirty work.
FileDropBean() - Constructor for class net.iharder.dnd.FileDropBean: Creates new FileDropBean
FileDropBeanBeanInfo - Class in net.iharder.dnd
FileDropBeanBeanInfo() - Constructor for class net.iharder.dnd.FileDropBeanBeanInfo
FileDropEvent - Class in net.iharder.dnd: This is the event that is passed to the filesDropped(...) method in your FileDropListener when files are dropped onto a registered drop target.
FileDropEvent(File[], Object) - Constructor for class net.iharder.dnd.FileDropEvent: Constructs a FileDropEvent with the array of files that were dropped and the FileDropBean that initiated the event.
FileDropListener - Interface in net.iharder.dnd: When using the FileDrop package in its JavaBean form, this listener will receive events when files are dropped onto registered targets.
FileHandlerUserDecision - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.webstart
FileHandlerUserDecision(HashMap<File, ArrayList<DragAndDropHandler>>) - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.webstart.FileHandlerUserDecision
FileHandlingListeners - Interface in org.graffiti.editor.actions
FileHandlingManager - Class in org.graffiti.editor.actions
FileHelper - Class in de.ipk_gatersleben.ag_nw.graffiti: Created on 13/05/2004 Extended on 14/08/2015
FileHelper() - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.FileHelper
filename - Variable in class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.biomodels.RestApiBiomodels
fileNew() - Method in interface org.graffiti.editor.actions.FileHandlingListeners
FileNewAction - Class in org.graffiti.editor.actions: The action for a new graph.
FileNewAction(MainFrame, ViewManager) - Constructor for class org.graffiti.editor.actions.FileNewAction: Creates a new FileNewAction object.
FileOpenAction - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.helper_classes: The action for the file open dialog.
FileOpenAction - Class in org.graffiti.editor.actions: The action for the file open dialog.
FileOpenAction(MainFrame) - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.helper_classes.FileOpenAction: Creates a new FileOpenAction object.
FileOpenAction(MainFrame, IOManager, ViewManager, StringBundle) - Constructor for class org.graffiti.editor.actions.FileOpenAction: Creates a new FileOpenAction object.
fileOpened(File) - Method in interface org.graffiti.editor.actions.FileHandlingListeners
FileSaveAction - Class in org.graffiti.editor.actions: The action for saving a graph.
FileSaveAction(MainFrame, IOManager, SessionManager) - Constructor for class org.graffiti.editor.actions.FileSaveAction: Creates a new FileSaveAction object.
FileSaveAllAction - Class in org.graffiti.editor.actions: The action for saving all open graphs.
FileSaveAllAction(MainFrame, IOManager) - Constructor for class org.graffiti.editor.actions.FileSaveAllAction: Creates a new FileSaveAllAction object.
FileSaveAsAction - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.helper_classes: The action for saving a graph to a named file.
FileSaveAsAction - Class in org.graffiti.editor.actions: The action for saving a graph to a named file.
FileSaveAsAction(MainFrame, IOManager, SessionManager, StringBundle) - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.helper_classes.FileSaveAsAction
FileSaveAsAction(MainFrame, IOManager, SessionManager, StringBundle) - Constructor for class org.graffiti.editor.actions.FileSaveAsAction
fileSaved(File, String, Graph) - Method in interface org.graffiti.editor.actions.FileHandlingListeners
fileSavedAs(File, File) - Method in interface org.graffiti.editor.actions.FileHandlingListeners
filesDropped(File[]) - Method in interface net.iharder.dnd.FileDrop.Listener: This method is called when files have been successfully dropped.
filesDropped(FileDropEvent) - Method in interface net.iharder.dnd.FileDropListener: Fired by the FileDropBean when files are dropped onto a drop target.
FileSystemHandler - Class in org.graffiti.plugin.io.resources
FileSystemHandler() - Constructor for class org.graffiti.plugin.io.resources.FileSystemHandler
FileSystemIOConfig - Class in org.graffiti.plugin.io.resources
FileSystemIOConfig(String) - Constructor for class org.graffiti.plugin.io.resources.FileSystemIOConfig
FILL - Static variable in interface info.clearthought.layout.TableLayoutConstants: Indicates that the row/column should fill the available space
FILL_ATTRIBUTE_LITERAL - Static variable in class de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.importers.xgmml.XGMMLConstants
fillAttributeMap(Map<String, Object>) - Method in interface de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.AttributeValuePairSupport
fillAttributeMap(Map<String, Object>) - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.Condition
fillAttributeMap(Map<String, Object>) - Method in interface de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.ConditionInterface
fillAttributeMap(Map<String, Object>) - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.Experiment
fillAttributeMap(Map<String, Object>) - Method in interface de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.ExperimentInterface
fillAttributeMap(Map<String, Object>) - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.NumericMeasurement
fillAttributeMap(Map<String, Object>) - Method in interface de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.NumericMeasurementInterface
fillAttributeMap(Map<String, Object>) - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.Sample
fillAttributeMap(Map<String, Object>) - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.SampleAverage
fillAttributeMap(Map<String, Object>) - Method in interface de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.SampleAverageInterface
fillAttributeMap(Map<String, Object>) - Method in interface de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.SampleInterface
fillAttributeMap(Map<String, Object>) - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.Substance
fillAttributeMap(Map<String, Object>) - Method in interface de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.SubstanceInterface
fillAttributeMap(Map<String, Object>, int) - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.ExperimentHeader
fillAttributeMap(Map<String, Object>, int) - Method in interface de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.ExperimentHeaderInterface
FILLCOLOR - Static variable in interface org.graffiti.graphics.GraphicAttributeConstants
FILLCOLOR_PATH - Static variable in interface org.graffiti.graphics.GraphicAttributeConstants: Path to fill color attribute
FillColorAnimation - Class in org.vanted.animation.animations: Animates the fill color of an attributable object.
FillColorAnimation(Attributable, List<ColorTimePoint>, double) - Constructor for class org.vanted.animation.animations.FillColorAnimation
FillColorAnimation(Attributable, List<ColorTimePoint>, double, double) - Constructor for class org.vanted.animation.animations.FillColorAnimation
FillColorAnimation(Attributable, List<ColorTimePoint>, double, double, int) - Constructor for class org.vanted.animation.animations.FillColorAnimation
FillColorAnimation(Attributable, List<ColorTimePoint>, double, double, int, Looper) - Constructor for class org.vanted.animation.animations.FillColorAnimation
FillColorAnimation(Attributable, List<ColorTimePoint>, double, double, int, Looper, Interpolator) - Constructor for class org.vanted.animation.animations.FillColorAnimation
FillColorAnimation(Attributable, List<ColorTimePoint>, double, double, int, Looper, Interpolator, ColorMode) - Constructor for class org.vanted.animation.animations.FillColorAnimation
fillDomainGridBand(Graphics2D, XYPlot, ValueAxis, Rectangle2D, double, double) - Method in class org.jfree.chart.renderer.AbstractXYItemRenderer: Fills a band between two values on the axis.
fillDomainGridBand(Graphics2D, XYPlot, ValueAxis, Rectangle2D, double, double) - Method in interface org.jfree.chart.renderer.XYItemRenderer: Fills a band between two values on the axis.
fillRangeGridBand(Graphics2D, XYPlot, ValueAxis, Rectangle2D, double, double) - Method in class org.jfree.chart.renderer.AbstractXYItemRenderer: Fills a band between two values on the range axis.
fillRangeGridBand(Graphics2D, XYPlot, ValueAxis, Rectangle2D, double, double) - Method in interface org.jfree.chart.renderer.XYItemRenderer: Fills a band between two values on the range axis.
fillTimeGaps - Variable in class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.ipk_graffitiview.chartDrawComponent.ChartOptions
filter(BufferedImage, BufferedImage) - Method in class org.graffiti.editor.GaussFilter
filter(Collection<String>, Collection<String>) - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.Experiment
filter(Collection<String>, Collection<String>) - Method in interface de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.editing_tools.script_helper.ExperimentInterface
FinalBoolean - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.davidtest
FinalBoolean(boolean) - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.davidtest.FinalBoolean
findBestColorIndex(ArrayList<Color>, Color) - Static method in class org.color.ColorUtil
findChildComponent(Component, Class<?>) - Static method in class org.ErrorMsg
findChildComponents(Component, Class<?>, ArrayList<Object>) - Static method in class org.ErrorMsg
findCommentRowStartingWith(String) - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.dbe.kegg_expression.KeggExpressionReader
findCommonColors(ArrayList<Color>, int, BackgroundTaskStatusProviderSupportingExternalCall) - Static method in class qmwi.kseg.som.SOM_ColorReduce
findComponentAt(int, int) - Method in class org.graffiti.plugins.views.defaults.GraffitiView
findHelp(JComponent) - Method in class org.graffiti.help.HelpContext: Returns a help context for the given gui component.
findMax() - Method in class placement.MaxPairingHeap: Find the biggest item in the priority queue.
findMax() - Method in interface placement.MaxPriorityQueue
findMax() - Method in class placement.ScanListPriorityQueue
findMax() - Method in class placement.SlowPriorityQueue
findMin() - Method in class placement.MinPairingHeap: Find the smallest item in the priority queue.
findMultipleEntries(ArrayList<Entry>) - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.kgml.Pathway
findParentComponent(Component, Class<?>) - Static method in class org.ErrorMsg
findPatternPosition(Edge, String, Integer) - Static method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.naive_pattern_finder.PatternAttributeUtils: Returns the position of the given pattern name and pattern index for the given edge.
findPatternPosition(Node, String, Integer) - Static method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.naive_pattern_finder.PatternAttributeUtils: Returns the position of the given pattern name and pattern index for the given node.
findPreviousIndex(List<T>, int, int, double) - Method in class org.vanted.animation.loopers.Looper: (Provided this method is not overridden) Finds the largest index, from a set of data points, who's getTime() method is <= time.
findPreviousIndex(List<T>, int, int, double) - Method in class org.vanted.animation.loopers.SwingLooper
findReaction(String) - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.kgml.Pathway
findReaction(Collection<String>) - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.kgml.Pathway
findRelations(String) - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.kgml.Pathway
FindReplaceDialog - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.invert_selection: Labels all selected nodes with unique numbers.
FindReplaceDialog() - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.invert_selection.FindReplaceDialog: Constructs a new instance.
FINISHED - org.vanted.plugins.layout.stressminimization.BackgroundStatus
finishedNewDownload() - Method in interface de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.FileDownloadStatusInformationProvider
finishedNewDownload() - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.kegg_reaction.ReactionService
finishedNewDownload() - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.kegg.KeggAPIServiceHelper
finishedNewDownload() - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.sib_enzymes.EnzymeService
finishedNewDownload() - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.transpath.TranspathService
finishOpenTransactions() - Method in class org.graffiti.event.ListenerManager
fireChartChanged() - Method in class org.jfree.chart.JFreeChart: Sends a default ChartChangeEvent to all registered listeners.
fireSelectionChanged() - Method in class org.graffiti.plugins.modes.defaults.MegaTools: DOCUMENT ME!
fireSelectionChanged(EditorSession) - Method in class org.graffiti.editor.MainFrame
fireSeriesChanged() - Method in class org.jfree.data.Series: General method for signalling to registered listeners that the series has been changed.
fireSessionChanged(Session) - Method in class org.graffiti.editor.MainFrame: Informs all SessionListeners that the active session has changed.
fireSessionDataChanged(Session) - Method in class org.graffiti.editor.MainFrame: Called, if the session or data (except graph data) in the session have been changed.
fireSessionDataChanged(Session) - Method in interface org.graffiti.session.SessionManager: Called, if the session or data (except graph data) in the session have been changed.
first() - Method in class org.vanted.indexednodes.IndexedNodeSet: Returns the index of the contained node with the smallest index.
First - Class in org.jfree.chart.demo: A simple introduction to using JFreeChart.
First() - Constructor for class org.jfree.chart.demo.First
FIRST - Variable in class de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.transpath.TranspathMolecule
FIRST_HOUR_IN_DAY - Static variable in class org.jfree.data.time.Hour: Useful constant for the first hour in the day.
FIRST_MILLISECOND_IN_SECOND - Static variable in class org.jfree.data.time.Millisecond: A constant for the first millisecond in a second.
FIRST_MINUTE_IN_HOUR - Static variable in class org.jfree.data.time.Minute: Useful constant for the first minute in a day.
FIRST_MONDAY_AFTER_1900 - Static variable in class org.jfree.chart.axis.SegmentedTimeline: Utility constant that defines the startTime as the first monday after 1/1/1970.
FIRST_MONTH_IN_QUARTER - Static variable in class org.jfree.data.time.Quarter: The first month in each quarter.
FIRST_MORE_GENERAL - org.graffiti.event.PathComparisonResult
FIRST_QUARTER - Static variable in class org.jfree.data.time.Quarter: Constant for quarter 1.
FIRST_SECOND_IN_MINUTE - Static variable in class org.jfree.data.time.Second: Useful constant for the first second in a minute.
FIRST_WEEK_IN_YEAR - Static variable in class org.jfree.data.time.Week: Constant for the first week in the year.
FisherOperationMode - Enum in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.dbe.database_processing.go_cluster_histogram
FisherProbability - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.exact_fisher_test
FisherProbability(BigDecimal, BigDecimal, boolean) - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.algorithms.exact_fisher_test.FisherProbability
FishEyeLayout - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.fish_eye: An implementation of a fish eye layout algorithm.
FishEyeLayout() - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.fish_eye.FishEyeLayout: Construct a new FishEyeLayout algorithm instance.
FishEyeLayoutPlugin - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.fish_eye: Plugin for a fish eye layouter algorithm
FishEyeLayoutPlugin() - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.fish_eye.FishEyeLayoutPlugin: Creates a new FishEyeLayoutPlugin object.
FIXED - de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.svg_exporter.SizeSetting
FixedMillisecond - Class in org.jfree.data.time: Wrapper for a java.util.Date object that allows it to be used as a RegularTimePeriod.
FixedMillisecond() - Constructor for class org.jfree.data.time.FixedMillisecond: Constructs a millisecond based on the current system time.
FixedMillisecond(long) - Constructor for class org.jfree.data.time.FixedMillisecond: Constructs a millisecond.
FixedMillisecond(Date) - Constructor for class org.jfree.data.time.FixedMillisecond: Constructs a millisecond.
fixSourceBendPoints(ArrayList<Vector2d>, View, Node) - Static method in class org.vanted.plugins.layout.adaptagrams.edgerouting.AdaptagramsRouting: Fixes the edge bend points at the source node.
fixTargetBendPoints(ArrayList<Vector2d>, View, Node) - Static method in class org.vanted.plugins.layout.adaptagrams.edgerouting.AdaptagramsRouting: Fixes the edge bend points at the target node.
FLAREX_ACCESS - org.FeatureSet
FloatAndDesc - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.statistics
FloatAndDesc(float, String) - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.statistics.FloatAndDesc
FloatAttribute - Class in org.graffiti.attributes: Contains a float
FloatAttribute(String) - Constructor for class org.graffiti.attributes.FloatAttribute: Constructs a new instance of a FloatAttribute.
FloatAttribute(String, float) - Constructor for class org.graffiti.attributes.FloatAttribute: Constructs a new instance of a FloatAttribute with the given value.
FloatAttribute(String, Float) - Constructor for class org.graffiti.attributes.FloatAttribute: Constructs a new instance of a FloatAttribute with the given value.
FloatEditComponent - Class in org.graffiti.plugins.editcomponents.defaults: An edit component for editing floats.
FloatEditComponent(FloatAttribute) - Constructor for class org.graffiti.plugins.editcomponents.defaults.FloatEditComponent: Constructs a new FloatEditComponent.
FloatEditComponent(Displayable) - Constructor for class org.graffiti.plugins.editcomponents.defaults.FloatEditComponent: Constructs a new FloatEditComponent.
FloatParameter - Class in org.graffiti.plugin.parameter: Parameter that can contain Float/float values.
FloatParameter(Float, Float, Float, Float, String, String) - Constructor for class org.graffiti.plugin.parameter.FloatParameter: Constructs a new Float parameter.
FloatParameter(Float, Float, Float, String, String) - Constructor for class org.graffiti.plugin.parameter.FloatParameter: Constructs a new Float parameter.
FloatParameter(Float, Float, String, String) - Constructor for class org.graffiti.plugin.parameter.FloatParameter: Constructs a new Float parameter.
FloatParameter(Float, String, String) - Constructor for class org.graffiti.plugin.parameter.FloatParameter: Constructs a new Float parameter.
FloatParameter(String, String) - Constructor for class org.graffiti.plugin.parameter.FloatParameter: Constructs a new float parameter.
flush() - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.kgml.TeeStream
flush() - Method in class de.ipk_gatersleben.ag_nw.graffiti.services.MyOutputStream
flushBase64() - Method in class org.graffiti.plugins.ios.exporters.graphml.Base64.OutputStream: Method added by PHIL.
flushBase64() - Method in class org.graffiti.plugins.ios.importers.graphml.parser.Base64.OutputStream: Method added by PHIL.
flushFile() - Static method in class qmwi.kseg.som.diagram.Aus: Insert the method's description here.
flushPreferences() - Static method in class org.vanted.scaling.DPIHelper: Write preferences to disk.
focus(KeyEvent) - Static method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.misc.invert_selection.SelectNodesComponent
focusAndHighlight(InspectorTab, boolean, boolean) - Method in class org.graffiti.plugin.inspector.InspectorTab
focusAndHighlightComponent(JComponent, String, InspectorTab, boolean, boolean) - Static method in class org.graffiti.plugin.inspector.InspectorTab
focusGained(FocusEvent) - Method in class org.jfree.chart.ui.ColorBarPropertyEditPanel: Does nothing.
focusGained(FocusEvent) - Method in class org.vanted.scaling.ScalingSlider
focusLost(FocusEvent) - Method in class org.jfree.chart.ui.ColorBarPropertyEditPanel: Revalidates minimum/maximum range.
focusLost(FocusEvent) - Method in class org.vanted.scaling.ScalingSlider
FolderPanel - Class in org
FolderPanel(String) - Constructor for class org.FolderPanel
FolderPanel(String, boolean, boolean, boolean, ActionListener) - Constructor for class org.FolderPanel
FolderPanel(String, boolean, ActionListener, String) - Constructor for class org.FolderPanel
FolderPanel.Iconsize - Enum in org
FONT_ATTRIBUTE_LITERAL - Static variable in class de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.importers.xgmml.XGMMLConstants
FontAttribute - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.editcomponents.font_settings
FontAttribute() - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.editcomponents.font_settings.FontAttribute
FontAttribute(String) - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.editcomponents.font_settings.FontAttribute
FontAttribute(String, String) - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.editcomponents.font_settings.FontAttribute
FontAttributeEditor - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.editcomponents.font_settings
FontAttributeEditor(Displayable) - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.editcomponents.font_settings.FontAttributeEditor
FontAttributePlugin - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.editcomponents.font_settings
FontAttributePlugin() - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.editcomponents.font_settings.FontAttributePlugin
FontChooser - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.helper_classes
FontChooser(Frame, Font, Color) - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.helper_classes.FontChooser
FONTNAME - Static variable in interface org.graffiti.graphics.GraphicAttributeConstants
FONTSIZE - Static variable in interface org.graffiti.graphics.GraphicAttributeConstants
FONTSTYLE - Static variable in interface org.graffiti.graphics.GraphicAttributeConstants
ForceDirectedEdgeLayout - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.fd_edge_routing
ForceDirectedEdgeLayout() - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.fd_edge_routing.ForceDirectedEdgeLayout
ForceDirectedEdgeLayoutPlugin - Class in de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.fd_edge_routing
ForceDirectedEdgeLayoutPlugin() - Constructor for class de.ipk_gatersleben.ag_nw.graffiti.plugins.layouters.fd_edge_routing.ForceDirectedEdgeLayoutPlugin
ForceDirectedLayoutWrapper - Class in org.vanted.plugins.layout.multilevelframework: Wrapper class to enable usage of the PatternspringEmbedder (a.k.a.
ForceDirectedLayoutWrapper() - Constructor for class org.vanted.plugins.layout.multilevelframework.ForceDirectedLayoutWrapper
format - Variable in class de.ipk_gatersleben.ag_nw.graffiti.plugins.gui.layout_control.biomodels.RestApiBiomodels
format(double, StringBuffer, FieldPosition) - Method in class org.jfree.chart.axis.CompassFormat
format(long, StringBuffer, FieldPosition) - Method in class org.jfree.chart.axis.CompassFormat
format(LogRecord) - Method in class org.graffiti.util.logging.SimpleFormatter: Returns the message of the given LogRecord
formatNumber(double, String) - Static method in class org.AttributeHelper
formObjectArray(double[]) - Static method in class org.jfree.data.DefaultContourDataset: Creates an object array from an array of doubles.
formObjectArray(double[][]) - Static method in class org.jfree.data.DefaultContourDataset: Creates an object array from an array of doubles.
FORWARD - Static variable in class org.jfree.chart.plot.DatasetRenderingOrder: Render datasets in the order 0, 1, 2, ..., N-1, where N is the number of datasets.
ForwardLooper - Class in org.vanted.animation.loopers: Similar to a StandardLooper but allows interpolators to interpolate from the end of the animation to the start of the animation.
ForwardLooper() - Constructor for class org.vanted.animation.loopers.ForwardLooper
frameClosing(EditorSession, View) - Method in class org.graffiti.editor.MainFrame
FRAMECOLOR - Static variable in interface org.graffiti.graphics.GraphicAttributeConstants
framesDeselect() - Method in class org.graffiti.editor.GravistoService: Unselects all editor frames in the main view.
FrameTabbedPane - Class in org.graffiti.editor
FrameTabbedPane() - Constructor for class org.graffiti.editor.FrameTabbedPane
FRAMETHICKNESS - Static variable in interface org.graffiti.graphics.GraphicAttributeConstants: Thickness of the edge!!!
FRAMETHICKNESS_PATH - Static variable in interface org.graffiti.graphics.GraphicAttributeConstants: Path to frame thickness attribute
FrameThicknessAnimation - Class in org.vanted.animation.animations: Animates the frame thickness of a GraphElement object.
FrameThicknessAnimation(GraphElement, List<DoubleTimePoint>, double) - Constructor for class org.vanted.animation.animations.FrameThicknessAnimation
FrameThicknessAnimation(GraphElement, List<DoubleTimePoint>, double, double) - Constructor for class org.vanted.animation.animations.FrameThicknessAnimation
FrameThicknessAnimation(GraphElement, List<DoubleTimePoint>, double, double, int) - Constructor for class org.vanted.animation.animations.FrameThicknessAnimation
FrameThicknessAnimation(GraphElement, List<DoubleTimePoint>, double, double, int, Looper) - Constructor for class org.vanted.animation.animations.FrameThicknessAnimation
FrameThicknessAnimation(GraphElement, List<DoubleTimePoint>, double, double, int, Looper, Interpolator) - Constructor for class org.vanted.animation.animations.FrameThicknessAnimation
freeMemory() - Method in class de.ipk_gatersleben.ag_nw.graffiti.plugins.databases.sib_enzymes.EnzymeService
freeMemory() - Method in interface org.graffiti.editor.MemoryHog: To release a data structure, just re-instantiate it, and GC would collect the now unreachable object some time in the future.
freeMemory(boolean) - Static method in class org.graffiti.editor.GravistoService
FREQUENCY - Static variable in class org.jfree.data.statistics.HistogramType: Frequency histogram.
fromString(String) - Method in interface org.ProvidesStringInitMethod
FTPhandler - Class in org.graffiti.plugin.io.resources
FTPhandler() - Constructor for class org.graffiti.plugin.io.resources.FTPhandler
full - org.vanted.plugins.layout.stressminimization.StressMinParamModel.MethodOption
FULL - Static variable in class info.clearthought.layout.SingleFiledLayout: Full justify components
FULL - Static variable in interface info.clearthought.layout.TableLayoutConstants: Indicates that the component is full justified in its cell
FULL_DATA - Static variable in interface org.jfree.data.MeterDataset: Deprecated.

A constant representing the full data range.
FULL_DATA_RANGE - Static variable in class org.jfree.chart.plot.MeterPlot: Constant to indicate the full data range.
FUNCAT_ACCESS - org.FeatureSet
FUNCTION - Static variable in class de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.sbml.SBML_Constants
FUNCTION_DEFINITION_FUNCTION - Static variable in class de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.sbml.SBML_Constants
FUNCTION_DEFINITION_ID - Static variable in class de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.sbml.SBML_Constants
FUNCTION_DEFINITION_NAME - Static variable in class de.ipk_gatersleben.ag_nw.graffiti.plugins.ios.sbml.SBML_Constants
Function2D - Interface in org.jfree.data: A function of the form y = f(x).

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